BibleArc.com
At BibleArc.com, learn and use arcing, a graphical tool used to determine, document, and discuss the flow of thought in the biblical text.
ESV Study Bible
The ESV Online Study Bible is available free to all who purchase a copy of the print edition and provides additional unique features to users, such as note taking and interactive cross-reference links.
Biblia.com
Biblia is a service from Logos Bible Software, offering free access to a collection of Bibles and Bible reference works.
Bible Study Tools
Bible Study Tools creates personalized Bible studies with the ability to highlight Scripture, save notes in the margin, search and compare 31 versions side by side on a split-panel screen, and the convenience of searching many commentaries, lexicons, concordances, historical writings, devotionals, and maps.
NET Bible Study Environment
Produced by Bible.org, this web application offers free access to the NET Bible along with its notes and articles, and parallel texts Greek & Hebrew texts with lexicon.
Bible Web App
The Bible Web App, developed by John Dyer, provides parsing and vocabulary aids for studying and reading the biblical languages.
Bible Gateway
With many translations, Bible Gateway is a free service for reading and researching Scripture online.